Observation 162100: Trebouxia jamesii (Hildreth & Ahmadjian) Gärtner
When: 2013-05-25
No herbarium specimen

Notes: Algae cultured on agar from Letharia collected in the sierras by Alex Smith.

Microscopy videos here:

https://www.youtube.com/watch?v=6dIT80aA2fk

https://www.youtube.com/watch?v=NYUYFIIZnF4

ITS sequence:

GCGTCCTGCACAACGCATTTGAAAGCATAGCGGGCAACGAAGGCATGCAACCGGCAAAGGTCACCTACCAAATCGGAACTCGCCCTTCCCTTGTAGGAAAGCAGCTCCCAAAGCGTGAATGAATTTCAGCTGACCGGCAACCTGCAAGGTAATCCGGACAGCCAGATCCAACTGCCTTTACATTGAATTCACAGTGTAAATTTAGTTGAGGGTAGTAGCCGACGCTGAGGCAGACATGCTCTTGGCCGAGGCCTCGAGCGCAATTTGCGTTCAAAGATTCGATGGTTCACGGAATTCTGCAATTCACACTACGTATCGCATTTCGCTGCGTTCTTCATCGTTACGGGAGCCAAGATATCCGTTGTTGAGAGTTGTTTTTAGTTATTCAGCCTACAGCCAGCAAGCCAGCCAGTAGAACCGTCTTCAGAAAAAATACTTTGAAGTGTTTGAAGCCACCCCTCACAACCAGTAAACCTTCAAGCTTGAAAGGCAAAAAGGTCCCAATTGATATTGGACCCGCCCAGCCAAGTCAACTGACACCAAAAGGAGCCAGCCCCTGACCTGCGCATCCAAAGGACGCTCCCCAAGAGGAACTGCTCACAATGGAAGGGCATAAGTAAGTTCGCGGTGTGGATACGATAGATTCAATGATCCTTCCGCAGGTTCaCCCTACGGAAGG

LSU sequence:

caTATCAaTAAGCGGAGGAAAAGAAACTAACTAGGATTCCCTTAGTAGCGGCGAGCGAACCGGGACCAGCCCAACTTGTAAATCATTAGCCTTCGGCTAATTGAATTGTAGTCTCAAGATGCGTTCTCTGCGGCGAGCAGTGCCCAATTTTCCTTGGAAAAGGGAGTCAGAGAGGGTGAGAACCCCGTCGGCATTTGCTTCAGTCGCTCCACGAGGCGCTTTCTCAGAGTCGGGTTGCTTGGGAATGCAGCCCTAAGTAGGTGGTAAATCCCATCTAAGGCTAAATACTGACGGGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAAAGAGAGTCAAAAGTGCTTGAAATTGTTGAGGGGGAAGGAATTGGAAGCCGTTTGTGCTCCCGGGCTTAAGTGGACAATTCTGTCCTCTGTACGCTCTGGGAGCCGGTCAGCATCGGCTATCGGACCGGGATAATAACTCTCCATTGGAGAGTGCATGCCGGCTCGGTGGCTGAGGAATTGAAAGGCGCTCTTTGAGTCCTCCGGGAACTGCGCCTTCAAGATGCTGGCAGAAGGCCTTCAATTCGCCCGTCTTGAAACACGG

Species Lists

Images

411241
IMG_4994.JPG
600x in water
411239
IMG_4988.JPG
411240
IMG_4989.JPG
200x darkfield
411242
IMG_4995.JPG
600x in water
411243
IMG_4996.JPG
600x in water
411244
IMG_4997.JPG
1000x in water
411245
IMG_4998.JPG

Proposed Names

87% (1)
Eye3 Eyes3
Based on microscopic features
Based on chemical features: 100% (607 out of 607) base pair match for Trebouxia jamesii Altermann CC2a from Castle Crags State Park, California

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Eye3 = Observer’s choice
Eyes3 = Current consensus

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Created: 2014-03-25 20:26:39 CDT (-0500)
Last modified: 2014-12-21 05:10:34 CST (-0600)
Viewed: 73 times, last viewed: 2016-11-19 21:21:25 CST (-0600)
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